R语言biogrowth包说明文档(版本 0.1.2)

返回R语言所有包列表

approx_env 生成环境条件的线性插值函数
calculate_gammas 计算每个伽马因子
calculate_gammas_secondary 拟合二次模型的伽马因子
check_primary_pars 主要模型参数的基本检查
check_secondary_pars 二次参数基本检查
coef.FitDynamicGrowth FitDynamicGrowth类
coef.FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
coef.FitIsoGrowth FitIsoGrowth类
coef.FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
coef.FitMultipleGrowthMCMC FitMultipleGrowthCMC类
coef.FitSecondaryGrowth FitSecondaryGrowth类
CPM_model 二次基数参数(CPM)模型
dBaranyi Baranyi增长模型
deviance.FitDynamicGrowth FitDynamicGrowth类
deviance.FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
deviance.FitIsoGrowth FitIsoGrowth类
deviance.FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
deviance.FitMultipleGrowthMCMC FitMultipleGrowthCMC类
deviance.FitSecondaryGrowth FitSecondaryGrowth类
distribution_to_logcount 达到一定微生物计数的时间分布
DynamicGrowth DynamicGrowth类
example_cardinal 几个生长实验获得的生长速率
example_dynamic_growth 动态条件下的微生物生长
example_env_conditions 动态实验中的环境条件
extract_primary_pars 构建主要模型的助手
extract_secondary_pars 构建二级模型的助手
FitDynamicGrowth FitDynamicGrowth类
FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
FitIsoGrowth FitIsoGrowth类
FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
FitMultipleGrowthMCMC FitMultipleGrowthCMC类
FitSecondaryGrowth FitSecondaryGrowth类
fitted.FitDynamicGrowth FitDynamicGrowth类
fitted.FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
fitted.FitIsoGrowth FitIsoGrowth类
fitted.FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
fitted.FitMultipleGrowthMCMC FitMultipleGrowthCMC类
fitted.FitSecondaryGrowth FitSecondaryGrowth类
fit_dynamic_growth 拟合动态增长模型
fit_isothermal_growth 拟合等温生长模型
fit_MCMC_growth 用MCMC拟合生长模型
fit_multiple_growth 多动态实验中生长模型的拟合
fit_multiple_growth_MCMC 基于MCMC的多动态实验生长模型拟合
fit_secondary_growth 拟合二次增长模型
full_Ratkowski 全拉特科夫斯基模型
get_dyna_residuals 动态预测残差
get_iso_residuals 等温预测残差
get_multi_dyna_residuals 多重动态预测残差
get_secondary_residuals 二次模型残差
is.DynamicGrowth 动态增长对象测试
is.FitDynamicGrowth FitDynamicGrowth对象测试
is.FitDynamicGrowthMCMC FitDynamicGrowthMCMC对象的测试
is.FitIsoGrowth 适生物体试验
is.FitMultipleDynamicGrowth 拟合多重动态生长对象的检验
is.FitMultipleDynamicGrowthMCMC fittmultipledynamicgrowthmcmc对象的测试
is.FitSecondaryGrowth 二次生长对象试验
is.IsothermalGrowth 等温生长物体试验
is.MCMCgrowth MCMCgrowth对象测试
is.StochasticGrowth 随机增长对象检验
IsothermalGrowth 等温生长类
iso_Baranyi 等温Baranyi模型
iso_repGompertz 重参数Gompertz模型
MCMCgrowth MCMCgrowth类
multiple_experiments 一组动态条件下的生长实验
plot.DynamicGrowth DynamicGrowth类
plot.FitDynamicGrowth FitDynamicGrowth类
plot.FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
plot.FitIsoGrowth FitIsoGrowth类
plot.FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
plot.FitMultipleGrowthMCMC FitMultipleGrowthCMC类
plot.FitSecondaryGrowth FitSecondaryGrowth类
plot.IsothermalGrowth 等温生长类
plot.MCMCgrowth MCMCgrowth类
plot.StochasticGrowth 随机增长类
plot.TimeDistribution 时间分布类
predict.FitDynamicGrowth FitDynamicGrowth类
predict.FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
predict.FitIsoGrowth FitIsoGrowth类
predict.FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
predict.FitMultipleGrowthMCMC FitMultipleGrowthCMC类
predict.FitSecondaryGrowth FitSecondaryGrowth类
predict_dynamic_growth 动态生长
predict_isothermal_growth 恒温微生物生长
predict_MCMC_growth MCMC拟合的随机增长
predict_stochastic_growth 变率等温生长
primary_model_data 初级增长模型的元信息
residuals.FitDynamicGrowth FitDynamicGrowth类
residuals.FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
residuals.FitIsoGrowth FitIsoGrowth类
residuals.FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
residuals.FitMultipleGrowthMCMC FitMultipleGrowthCMC类
residuals.FitSecondaryGrowth FitSecondaryGrowth类
secondary_model_data 二次生长模型的元信息
StochasticGrowth 随机增长类
summary.FitDynamicGrowth FitDynamicGrowth类
summary.FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
summary.FitIsoGrowth FitIsoGrowth类
summary.FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
summary.FitMultipleGrowthMCMC FitMultipleGrowthCMC类
summary.FitSecondaryGrowth FitSecondaryGrowth类
TimeDistribution 时间分布类
time_to_logcount 达到给定微生物计数的时间
trilinear_model 三线性增长模型
vcov.FitDynamicGrowth FitDynamicGrowth类
vcov.FitDynamicGrowthMCMC FitDynamicGrowthMCMC类
vcov.FitIsoGrowth FitIsoGrowth类
vcov.FitMultipleDynamicGrowth FitMultipleDynamicGrowth类
vcov.FitMultipleGrowthMCMC FitMultipleGrowthCMC类
vcov.FitSecondaryGrowth FitSecondaryGrowth类
zwietering_gamma zwitering伽马模型